GAFAMS, STARTUPS & INNOVATION IN HEALTHCARE by PHARMAGEEK
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Rescooped by Lionel Reichardt / le Pharmageek from healthcare technology
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Artificial intelligence could alert for focal skeleton/bone marrow uptake in Hodgkin’s lymphoma patients staged with FDG-PET/CT

Artificial intelligence could alert for focal skeleton/bone marrow uptake in Hodgkin’s lymphoma patients staged with FDG-PET/CT | GAFAMS, STARTUPS & INNOVATION IN HEALTHCARE by PHARMAGEEK | Scoop.it

Skeleton/bone marrow involvement in patients with newly diagnosed Hodgkin’s lymphoma (HL) is an important predictor of adverse outcomes1. Studies show that FDG-PET/CT upstages patients with uni- or multifocal skeleton/bone marrow uptake (BMU) when iliac crest bone marrow biopsy fails to find evidence of histology-proven involvement. The general recommendation is, therefore, that bone marrow biopsy can be avoided when FDG-PET/CT is performed at staging.

 

 

Our aim was to develop an AI-based method for the detection of focal skeleton/BMU and quantification of diffuse BMU in patients with HL undergoing staging with FDG-PET/CT. The output of the AI-based method in a separate test set was compared to the image interpretation of ten physicians from different hospitals. Finally, the AI-based quantification of diffuse BMU was compared to manual quantification.

 

Artificial intelligence-based classification

A convolutional neural network (CNN) was used to segment the skeletal anatomy11. Based on this CNN, the bone marrow was defined by excluding the edges from each individual bone; more precisely, 7 mm was excluded from the humeri and femora, 5 mm was excluded from the vertebrae and hip bones, and 3 mm was excluded from the remaining bones.

Focal skeleton/bone marrow uptake

The basic idea behind our approach is that the distribution of non-focal BMU has a light tail and most pixels will have an uptake reasonably close to the average. There will still be variations between different bones. Most importantly, we found that certain bones were much more likely to have diffuse BMU than others. Hence, we cannot use the same threshold for focal uptake in all bones. At the other end, treating each bone individually is too susceptible to noise. As a compromise, we chose to divide the bones into two groups:

  • spine”—defined as the vertebrae, sacrum, and coccyx as well as regions in the hip bones within 50 mm from these locations, i.e., including the sacroiliac joints.

  • other bones”—defined as the humeri, scapulae, clavicles, ribs, sternum, femora, and the remaining parts of the hip bones.

For each group, the focal standardized uptake values (SUVs) were quantified using the following steps:

  1. Threshold computation. A threshold (THR) was computed using the mean and standard deviation (SD) of the SUV inside the bone marrow. The threshold was set to
    =SUVmean+2SD.

 

  • 2. Abnormal bone region. The abnormal bone region was defined in the following way:

    Only the pixels segmented as bone and where SUV > THR were considered. To reduce the issues of PET/CT misalignment and spill over, a watershed transform was used to assign each of these pixels to a local maximum in the PET image. If this maximum was outside the bone mask, the uptake was assumed to be leaking into the bone from other tissues and was removed. Finally, uptake regions smaller than 0.1 mL were removed.

  • 3.Abnormal bone SUV quantification. The mean squared abnormal uptake (MSAU) was first calculated as
    MSAU=meanof(SUVTHR)2overtheabnormalboneregion.

 

To quantify the abnormal uptake, we used the total squared abnormal uptake (TSAU), rather than the more common total lesion glycolysis (TLG). We believe TLG tends to overestimate the severity of larger regions with moderate uptake. TSAU will assign a much smaller value to such lesions, reflecting the uncertainty that is often associated with their classification. Instead, TSAU will give a larger weight to small lesions with very high uptake. This reflects both the higher certainty with respect to their classification and the severity typically associated to very high uptake.
TSAU=MSAU×(volumeoftheabnormalboneregion).

This calculation leads to two TSAU values; one for the “spine” and one for the “other bones”. As the TSAU value can be nonzero even for patients without focal uptake, cut-off values were tuned using the training cohort. The AI method was adjusted in the training group to have a positive predictive value of 65% and a negative predictive value of 98%. For the “spine”, a cut-off of 0.5 was used, and for the “other bones”, a cut-off of 3.0 was used. If one of the TSAU values was higher than the corresponding cut-off, the patient was considered to have focal uptake.

 

Results

Focal uptake

Fourteen of the 48 cases were classified as having focal skeleton/BMU by the AI-based method. The majority of physicians classified 7/48 cases as positive and 41/48 cases as negative for having focal skeleton/BMU. The majority of the physicians agreed with the AI method in 39 of the 48 cases. Six of the seven positive cases (86%) identified by the majority of physicians were identified as positive by the AI method, while the seventh was classified as negative by the AI method and by three of the ten physicians.

 

Thirty-three of the 41 negative cases (80%) identified by the majority of physicians were also classified as negative by the AI method. In seven of the remaining eight patients, 1–3 physicians (out of the ten total) classified the cases as having focal uptake, while in one of the eight cases none of the physicians classified it as having focal uptake. These findings indicate that the AI method has been developed towards high sensitivity, which is necessary to highlight suspicious uptake.

 

Conclusions

The present study demonstrates that an AI-based method can be developed to highlight suspicious focal skeleton/BMU in HL patients staged with FDG-PET/CT. This AI-based method can also objectively provide results regarding high versus low BMU by calculating the SUVmedian value in the whole spine marrow and the liver. Additionally, the study also demonstrated that inter-observer agreement regarding both focal and diffuse BMU is moderate among nuclear medicine physicians with varying levels of experience working at different hospitals. Finally, our results show that the automated method regarding diffuse BMU is comparable to the manual ROI method.

 

read the original paper at https://www.nature.com/articles/s41598-021-89656-9

 


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Rescooped by Lionel Reichardt / le Pharmageek from Co-creation in health
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Digital Health: Will Pharma Follow or Lead?

Digital Health: Will Pharma Follow or Lead? | GAFAMS, STARTUPS & INNOVATION IN HEALTHCARE by PHARMAGEEK | Scoop.it
Time to step up or step out of the way?

The digital health movement is growing rapidly. Almost everyday we hear of new technology, apps and ideas that bring the promise of improved medical care, health and wellness. From hand-held ultrasound devices to smart phone arrhythmia monitoring, the digital health movement isn’t only about expensive pedometers and the ‘gym elite’ but about key areas in health and wellness that will have a direct impact on medical care. Pharma–for better or worse–has a seat at this table.

Concept and Illustration: Peter Zamiska

Yet there seems to be a bit of a disconnect between pharma and many of the innovations that are emerging. Perhaps it’s the very nature of these innovations that conflicts with the conservative pharmaceutical industry. Perhaps it’s still a period of ‘watchful waiting’. Or even, it could be yesterday’s brand managers, sales reps and administrators who, while caressing the piles of pills that define an industry, are just missing what many define as the next revolution since the personal computer.

Whatever the case, there are many compelling reasons for pharma to embrace digital health. If not for today, certainly in the not so distant future.

The future of medical practice and pharmaceutical selling

The pressures on the practice of medicine are numerous. From healthcare reform to the tsunami of clinical information and data, today’s providers are looking for ways to care and to cope. Technology is an essential part of the solution. And digital health is a central part of this equation. The touch points for pharma are numerous and represent areas for engagement and support. On demand information and analytics will shift the focus from bed side ‘rote memorization’ to “augmented digital expression” where a differential diagnosis and interventions come with the aid of a hand-held computer screen. Further, the looming role of the electronic medical record will also set into motion a transformation from paper to electrons will catalyze the digital health movement and accelerate adoption. Many of these changes are happening now as a new generation of medical students begin to use their smart phones at bedside as a diagnostic and therapeutic tool with the same zeal as yesterday’s physicians who clung to their stethoscopes as validation of their clinical acumen.

The traditional role of the sales rep must also change. The consultative nature of the brand detail will shift in parallel with the technology-driven changes in practice. Pressing the flesh will transform to clinking a link and clinicians will adopt the conventions of today’s consumers and seek information in a controlled on-line setting. But perhaps more importantly, the days of typical case studies and efficacy charts will be replaced with a richer and more compelling presentation that are consistent with what this ‘techno’ generational will simply expect. And the experts themselves will change too–the standard practice of expert professorial engagement and peer to peer influence may be enhanced by none other than IBM IBM +1.92%‘s Watson and other ‘electronic’ thought-leaders.

Patients and caregivers will play an important role in the evolution of healthcare and digital health. The emergence of “citizen scientists” who are empowered by increasingly focused and filtered information will act–alone and with like-minded people–to take greater control of care. Self-advocacy will change ‘population-based’ treatment guidelines to more personalized care. And the pandering “ask your doctor” headlines of DTC advertisements will shift to data-based claims that empower the patient and make a much stronger and direct link between the pharmaceutical industry and the true end-user, not the physician.

Maybe it’s digital narcolepsy?

Whatever the cause, pharma needs to take notice. The cases studies and talking points that drive a traditional brand detail must be rethought and redefined in the context of tomorrow’s clinical reality. A reality that’s actually happening today.

Via Celine Sportisse, Giuseppe Fattori
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